Domain ID e2v3wB3

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_C
UID: 000110943
Type: Automatic domain
Parent: e1pvdA3
Range: B:342-524
Ligands: MG SO4 TPP
PDB: 2v3w
PDB Description: BENZOYLFORMATE DECARBOXYLASE
UniProt: P20906
Species: Pseudomonas putida

Structure of domain e2v3wB3

Domains in the same chain:

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e2v3wB2 B:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wB1 B:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2v3wB3 B:342-524 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2v3wA2 A:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wA1 A:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2v3wA3 A:342-524 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wB2 B:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wB1 B:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2v3wB3 B:342-524 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wC2 C:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wC1 C:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2v3wC3 C:342-524 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wD2 D:2-181 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2v3wD1 D:182-341 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2v3wD3 D:342-524 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2v3wB3 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2v3wD2 B:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2v3wD3 B:X,Y,Z->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2v3wC1 B:-X+1,Y-1/2,-Z-1/2->C:x,y,z Rossmann-related Interaction Interface Pymol