Domain ID e2v4dB7

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Unmapped domains
UID: 001175358
Type: Automatic domain
Parent: e1vf7A1
Range: B:13-38,B:172-262
Ligands: SO4
PDB: 2v4d
PDB Description: MULTIDRUG RESISTANCE PROTEIN MEXA
UniProt: P52477
Species: Pseudomonas aeruginosa

Structure of domain e2v4dB7

Domains in the same chain:

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e2v4dB7 B:13-38,B:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dB4 B:39-72,B:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dB6 B:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dB5 B:263-339 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e2v4dA1 A:28-38,A:170-259 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dA3 A:39-72,A:135-169 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dA2 A:73-134 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dB7 B:13-38,B:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dB4 B:39-72,B:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dB6 B:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dB5 B:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dC11 C:13-38,C:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dC8 C:39-72,C:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dC10 C:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dC9 C:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dD4 D:30-38,D:170-259 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dD6 D:39-72,D:135-169 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dD5 D:73-134 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dE11 E:13-38,E:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dE8 E:39-72,E:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dE10 E:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dE9 E:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dF11 F:13-38,F:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dF8 F:39-72,F:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dF10 F:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dF9 F:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dG11 G:13-38,G:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dG8 G:39-72,G:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dG10 G:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dG9 G:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dH11 H:13-38,H:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dH8 H:39-72,H:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dH10 H:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dH9 H:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dI11 I:13-38,I:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dI8 I:39-72,I:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dI10 I:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dI9 I:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dJ11 J:13-38,J:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dJ8 J:39-72,J:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dJ10 J:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dJ9 J:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dK11 K:13-38,K:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dK8 K:39-72,K:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dK10 K:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dK9 K:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dL11 L:13-38,L:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dL8 L:39-72,L:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dL10 L:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dL9 L:263-339 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dM11 M:13-38,M:172-262 cradle loop barrel RIFT-related Alanine racemase-C
e2v4dM8 M:39-72,M:136-171 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2v4dM10 M:73-135 helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins helical hairpin of HlyD-like secretion proteins
e2v4dM9 M:263-339 cradle loop barrel RIFT-related Alanine racemase-C

Structural contacts of domain e2v4dB7 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2v4dC11 B:X,Y,Z->C:x,y,z RIFT-related Interaction Interface Pymol
e2v4dA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e2v4dA3 B:x,y,z->A:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2v4dM11 B:X,Y,Z-1->M:x,y,z RIFT-related Interaction Interface Pymol