Domain ID e2v5xA1

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: Arginase/deacetylase
  • F: Hist_deacetyl
UID: 000326744
Type: Automatic domain
Parent: e1c3pA1
Range: A:14-376
Ligands: K V5X ZN
PDB: 2v5x
PDB Description: HISTONE DEACETYLASE 8
UniProt: Q9BY41
Hsap BLAST neighbor: Q9BY41
Species: Homo sapiens

Structure of domain e2v5xA1

Structural contacts of domain e2v5xA1 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2v5xB1 A:X,Y,Z->B:x,y,z HAD domain-related Interaction Interface Pymol
e2v5xB1 A:X-1/2,-Y-1/2,-Z+1->B:x,y,z HAD domain-related Interaction Interface Pymol
e2v5xB1 A:X-1/2,-Y+1/2,-Z+1->B:x,y,z HAD domain-related Interaction Interface Pymol
e2v5xB1 A:x,y,z->B:-X+1/2,-Y,Z-1/2 HAD domain-related Interaction Interface Pymol
e2v5xB1 A:-X+1/2,-Y,Z-1/2->B:x,y,z HAD domain-related Interaction Interface Pymol
e2v5xA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 HAD domain-related Interaction Interface Pymol
e2v5xA1 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z HAD domain-related Interaction Interface Pymol