Domain ID e2vadA1

Download files:
  • A: beta barrels
  • X: GFP-like
  • H: GFP-like
  • T: GFP-like
  • F: GFP
UID: 000166183
Type: Automatic domain
Parent: e1oxdA1
Range: A:4-223
Ligands: CL EDO ZN
PDB: 2vad
PDB Description: RED FLUORESCENT PROTEIN
UniProt: Q9U6Y8
Species: Discosoma sp.

Structure of domain e2vadA1

Domains in the same chain:

e2vadA1 A:4-223 GFP-like GFP-like GFP-like

Domains in the same PDB:

e2vadA1 A:4-223 GFP-like GFP-like GFP-like

Structural contacts of domain e2vadA1 of H-group "GFP-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vadA1 A:x,y,z->A:-X-1,Y-1/2,-Z-1/2 GFP-like Interaction Interface Pymol
e2vadA1 A:-X-1,Y-1/2,-Z-1/2->A:x,y,z GFP-like Interaction Interface Pymol
e2vadA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z GFP-like Interaction Interface Pymol
e2vadA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z GFP-like Interaction Interface Pymol
e2vadA1 A:x,y,z->A:-X-1/2,-Y,Z-1/2 GFP-like Interaction Interface Pymol
e2vadA1 A:-X-1/2,-Y,Z-1/2->A:x,y,z GFP-like Interaction Interface Pymol
e2vadA1 A:x,y,z->A:X-1,Y,Z GFP-like Interaction Interface Pymol
e2vadA1 A:X-1,Y,Z->A:x,y,z GFP-like Interaction Interface Pymol
e2vadA1 A:x,y,z->A:-X,Y-1/2,-Z-1/2 GFP-like Interaction Interface Pymol
e2vadA1 A:-X,Y-1/2,-Z-1/2->A:x,y,z GFP-like Interaction Interface Pymol