ECOD: domain e2vc9A5

Domain ID e2vc9A5

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: NAGLU

UID:	001762145
Type:	Automatic domain
Parent:	e4a4aA3
Range:	A:291-622
Ligands:	GOL NOK
PDB:	2vc9
PDB Description:	ALPHA-N-ACETYLGLUCOSAMINIDASE
UniProt:	Q0TST1
Hsap BLAST neighbor:	P54802
Species:	Clostridium perfringens

Domain
In chain context
In PDB context

Structure of domain e2vc9A5

Domains in the same chain:

Download Pymol

e2vc9A2	A:26-165	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2vc9A1	A:166-290	Zincin-like	beta-N-acetylhexosaminidase-like domain	beta-N-acetylhexosaminidase-like domain
e2vc9A5	A:291-622	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vc9A4	A:623-909	Hyaluronidase domain-like	Hyaluronidase post-catalytic domain-like	Hyaluronidase post-catalytic domain-like

Domains in the same PDB:

e2vc9A2	A:26-165	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2vc9A1	A:166-290	Zincin-like	beta-N-acetylhexosaminidase-like domain	beta-N-acetylhexosaminidase-like domain
e2vc9A5	A:291-622	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vc9A4	A:623-909	Hyaluronidase domain-like	Hyaluronidase post-catalytic domain-like	Hyaluronidase post-catalytic domain-like

Structural contacts of domain e2vc9A5 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vc9A2	A:x,y,z->A:X-Y,X,Z+1/6	Galactose-binding domain-like	Interaction Interface Pymol
e2vc9A4	A:x,y,z->A:X-Y,X,Z+1/6	Hyaluronidase post-catalytic domain-like	Interaction Interface Pymol
e2vc9A1	A:x,y,z->A:X-Y,X,Z+1/6	beta-N-acetylhexosaminidase-like domain	Interaction Interface Pymol