ECOD: domain e2vcaA1

Domain ID e2vcaA1

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: NAGLU

UID:	001765851
Type:	Automatic domain
Parent:	e4a4aA3
Range:	A:291-622
Ligands:	GOL NAG
PDB:	2vca
PDB Description:	ALPHA-N-ACETYLGLUCOSAMINIDASE
UniProt:	Q0TST1
Hsap BLAST neighbor:	P54802
Species:	Clostridium perfringens

Domain
In chain context
In PDB context

Structure of domain e2vcaA1

Domains in the same chain:

Download Pymol

e2vcaA4	A:26-165	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2vcaA3	A:166-290	Zincin-like	beta-N-acetylhexosaminidase-like domain	beta-N-acetylhexosaminidase-like domain
e2vcaA1	A:291-622	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vcaA2	A:623-912	Hyaluronidase domain-like	Hyaluronidase post-catalytic domain-like	Hyaluronidase post-catalytic domain-like

Domains in the same PDB:

e2vcaA4	A:26-165	jelly-roll	Galactose-binding domain-like	Galactose-binding domain-like
e2vcaA3	A:166-290	Zincin-like	beta-N-acetylhexosaminidase-like domain	beta-N-acetylhexosaminidase-like domain
e2vcaA1	A:291-622	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e2vcaA2	A:623-912	Hyaluronidase domain-like	Hyaluronidase post-catalytic domain-like	Hyaluronidase post-catalytic domain-like

Structural contacts of domain e2vcaA1 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vcaA3	A:x,y,z->A:X-Y,X,Z+1/6	beta-N-acetylhexosaminidase-like domain	Interaction Interface Pymol
e2vcaA4	A:x,y,z->A:X-Y,X,Z+1/6	Galactose-binding domain-like	Interaction Interface Pymol
e2vcaA2	A:x,y,z->A:X-Y,X,Z+1/6	Hyaluronidase post-catalytic domain-like	Interaction Interface Pymol