Domain ID e2vd3B2

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: HisG
UID: 001522974
Type: Automatic domain
Parent: e1h3dA4
Range: B:-1-90,B:181-212
Ligands: CL HIS MG MPD
PDB: 2vd3
PDB Description: ATP PHOSPHORIBOSYLTRANSFERASE
UniProt: O27550
Species:

Structure of domain e2vd3B2

Structural contacts of domain e2vd3B2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vd3B2 B:x,y,z->B:-Y+2,X-Y+1,Z Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3B1 B:x,y,z->B:-Y+2,X-Y+1,Z GlnB-like Interaction Interface Pymol
e2vd3B2 B:-Y+2,X-Y+1,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3B1 B:-Y+2,X-Y+1,Z->B:x,y,z GlnB-like Interaction Interface Pymol
e2vd3B3 B:-Y+2,X-Y+1,Z->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3A3 B:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3B1 B:x,y,z->B:X-Y+2/3,-Y+4/3,-Z+1/3 GlnB-like Interaction Interface Pymol
e2vd3B2 B:x,y,z->B:X-Y+2/3,-Y+4/3,-Z+1/3 Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3B3 B:x,y,z->B:X-Y+2/3,-Y+4/3,-Z+1/3 Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3B3 B:X-Y+2/3,-Y+4/3,-Z+1/3->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3B2 B:X-Y+2/3,-Y+4/3,-Z+1/3->B:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e2vd3B1 B:X-Y+2/3,-Y+4/3,-Z+1/3->B:x,y,z GlnB-like Interaction Interface Pymol