ECOD: domain e2vdlA1

Domain ID e2vdlA1

A: beta duplicates or obligate multimers
X: beta-propeller-like
H: beta-propeller
T: 7-bladed
F: FG-GAP

UID:	000347651
Type:	Automatic domain
Parent:	e1tyeA1
Range:	A:1-452
Ligands:	CA GOL NAG
PDB:	2vdl
PDB Description:	INTEGRIN ALPHA-IIB
UniProt:	P08514
Hsap BLAST neighbor:	P08514
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2vdlA1

Domains in the same chain:

Download Pymol

e2vdlA1	A:1-452	beta-propeller-like	beta-propeller	7-bladed

Domains in the same PDB:

e2vdlA1	A:1-452	beta-propeller-like	beta-propeller	7-bladed
e2vdlB1	B:1-57	Trefoil/Plexin domain-like	Trefoil/Plexin domain-like	Trefoil/Plexin domain-like
e2vdlB3	B:58-106,B:355-440	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vdlB2	B:107-354	HAD domain-like	HAD domain-related	vWA-like
e2vdlH2	H:1-119	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vdlH1	H:121-221	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vdlL1	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vdlL2	L:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vdlA1 of H-group "beta-propeller":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vdlB2	A:X,Y,Z->B:x,y,z	HAD domain-related	Interaction Interface Pymol
e2vdlA1	A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3	beta-propeller	Interaction Interface Pymol
e2vdlA1	A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z	beta-propeller	Interaction Interface Pymol
e2vdlB3	A:X-Y,-Y,-Z+4/3->B:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2vdlB1	A:X-Y,-Y,-Z+4/3->B:x,y,z	Trefoil/Plexin domain-like	Interaction Interface Pymol