Domain ID e2vdrA1

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  • A: beta duplicates or obligate multimers
  • X: beta-propeller-like
  • H: beta-propeller
  • T: 7-bladed
  • F: FG-GAP
UID: 000347681
Type: Automatic domain
Parent: e1tyeA1
Range: A:1-452
Ligands: CA GOL NAG
PDB: 2vdr
PDB Description: INTEGRIN ALPHA-IIB
UniProt: P08514
Hsap BLAST neighbor: P08514
Species: Homo sapiens

Structure of domain e2vdrA1

Structural contacts of domain e2vdrA1 of H-group "beta-propeller":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vdrB2 A:X,Y,Z->B:x,y,z HAD domain-related Interaction Interface Pymol
e2vdrA1 A:x,y,z->A:-X+2,-X+Y+1,-Z+2/3 beta-propeller Interaction Interface Pymol
e2vdrA1 A:-X+2,-X+Y+1,-Z+2/3->A:x,y,z beta-propeller Interaction Interface Pymol
e2vdrB3 A:X-Y,-Y,-Z+4/3->B:x,y,z Trefoil/Plexin domain-like Interaction Interface Pymol