| UID: | 001290142 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2vduB2 |
| Range: | D:2-48,D:100-436 |
| PDB: | 2vdu |
| PDB Description: | TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE- ASSOCIATED WD REPEAT PROTEIN TRM82 |
| UniProt: | Q03774 |
| Hsap BLAST neighbor: | P57081 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e2vduD1
Domains in the same chain:
| e2vduD1 | D:2-48,D:100-436 | beta-propeller-like | beta-propeller | 6-bladed |
Domains in the same PDB:
| e2vduB2 | B:2-48,B:100-282,B:303-436 | beta-propeller-like | beta-propeller | 6-bladed |
| e2vduD1 | D:2-48,D:100-436 | beta-propeller-like | beta-propeller | 6-bladed |
| e2vduE1 | E:66-286 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
| e2vduF1 | F:66-286 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases |
Structural contacts of domain e2vduD1 of H-group "beta-propeller":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2vduB2 | D:X-1,Y,Z+1->B:x,y,z | beta-propeller | Interaction Interface Pymol |
| e2vduD1 | D:x,y,z->D:X-1,Y,Z | beta-propeller | Interaction Interface Pymol |
| e2vduD1 | D:X-1,Y,Z->D:x,y,z | beta-propeller | Interaction Interface Pymol |
