ECOD: domain e2vgwA2

Domain ID e2vgwA2

A: a/b three-layered sandwiches
X: PLP-dependent transferases
H: PLP-dependent transferases
T: PLP-dependent transferases
F: SHMT

UID:	000332499
Type:	Automatic domain
Parent:	e1kl1A2
Range:	A:1-275
Ligands:	GLY MPD PLP
PDB:	2vgw
PDB Description:	SERINE HYDROXYMETHYLTRANSFERASE
UniProt:	Q7SIB6
Hsap BLAST neighbor:	P34897
Species:	Geobacillus stearothermophilus

Domains in the same chain:

Download Pymol

e2vgwA2	A:1-275	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e2vgwA1	A:276-406	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e2vgwA2	A:1-275	PLP-dependent transferases	PLP-dependent transferases	PLP-dependent transferases
e2vgwA1	A:276-406	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases	C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e2vgwA2 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vgwA1	A:x,y,z->A:-X,-Y,Z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:x,y,z->A:-X,-Y,Z	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:-X,-Y,Z->A:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA1	A:-X,-Y,Z->A:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e2vgwA1	A:X-1/2,-Y+1/2,-Z+1->A:x,y,z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e2vgwA1	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA1	A:x,y,z->A:X-1/2,-Y+1/2,-Z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:x,y,z->A:-X,-Y,Z-1	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:-X,-Y,Z-1->A:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:x,y,z->A:-X+1,-Y,Z	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA2	A:-X+1,-Y,Z->A:x,y,z	PLP-dependent transferases	Interaction Interface Pymol
e2vgwA1	A:x,y,z->A:-X+1/2,Y-1/2,-Z	C-terminal domain in some PLP-dependent transferases	Interaction Interface Pymol