Domain ID e2vjyD2

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  • A: a/b three-layered sandwiches
  • X: Thiamin diphosphate-binding fold (THDP-binding)
  • H: Thiamin diphosphate-binding fold (THDP-binding)
  • T: Thiamin diphosphate-binding fold (THDP-binding)
  • F: TPP_enzyme_N
UID: 000356821
Type: Automatic domain
Parent: e1pvdA2
Range: D:2-180
Ligands: ALK TPP
PDB: 2vjy
PDB Description: PYRUVATE DECARBOXYLASE
UniProt: Q12629
Species: Kluyveromyces lactis

Structure of domain e2vjyD2

Domains in the same chain:

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e2vjyD2 D:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyD1 D:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vjyD3 D:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2vjyA2 A:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyA1 A:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vjyA3 A:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyB2 B:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyB1 B:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vjyB3 B:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyC2 C:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyC1 C:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vjyC3 C:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyD2 D:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vjyD1 D:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vjyD3 D:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2vjyD2 of H-group "Thiamin diphosphate-binding fold (THDP-binding)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vjyC2 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vjyC3 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vjyC1 D:x,y,z->C:X,Y,Z Rossmann-related Interaction Interface Pymol