Domain ID e2vk8D1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 000356856
Type: Automatic domain
Parent: e2ez9A1
Range: D:181-359
Ligands: 2OP
PDB: 2vk8
PDB Description: PYRUVATE DECARBOXYLASE ISOZYME 1
UniProt: P06169
Species: Saccharomyces cerevisiae

Structure of domain e2vk8D1

Domains in the same chain:

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e2vk8D2 D:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8D1 D:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk8D3 D:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2vk8A2 A:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8A1 A:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk8A3 A:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8B2 B:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8B1 B:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk8B3 B:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8C2 C:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8C1 C:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk8C3 C:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8D2 D:2-180 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2vk8D1 D:181-359 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2vk8D3 D:360-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2vk8D1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vk8C2 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2vk8A1 D:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e2vk8C1 D:X-1,Y,Z-1->C:x,y,z Rossmann-related Interaction Interface Pymol