Domain ID e2vkmD3

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: Asp
UID: 001249799
Type: Automatic domain
Parent: e1wkrA2
Range: D:45P-183
Ligands: BSD
PDB: 2vkm
PDB Description: BETA-SECRETASE 1
UniProt: P56817
Hsap BLAST neighbor: P56817
Species: Homo sapiens

Structure of domain e2vkmD3

Structural contacts of domain e2vkmD3 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vkmA3 D:-X,Y-1/2,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol
e2vkmA2 D:-X+1,Y-1/2,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol
e2vkmA3 D:-X+1,Y-1/2,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol
e2vkmB2 D:-X+1,Y-1/2,-Z+1->B:x,y,z RIFT-related Interaction Interface Pymol
e2vkmB3 D:-X+1,Y-1/2,-Z+1->B:x,y,z RIFT-related Interaction Interface Pymol
e2vkmC2 D:x,y,z->C:X,Y,Z RIFT-related Interaction Interface Pymol
e2vkmD2 D:-X+1,Y-1/2,-Z+1->D:x,y,z RIFT-related Interaction Interface Pymol