| UID: | 000344712 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2ccvA1 |
| Range: | A:161-257 |
| Ligands: | CL MBG |
| PDB: | 2vmd |
| PDB Description: | DISCOIDIN-2 |
| UniProt: | P42530 |
| Species: |
Structure of domain e2vmdA1
Domains in the same chain:
| e2vmdA2 | A:6-160 | jelly-roll | Galactose-binding domain-like | Galactose-binding domain-like |
| e2vmdA1 | A:161-257 | Agglutinin HPA-like | Agglutinin HPA-like | Agglutinin HPA-like |
Domains in the same PDB:
| e2vmdA2 | A:6-160 | jelly-roll | Galactose-binding domain-like | Galactose-binding domain-like |
| e2vmdA1 | A:161-257 | Agglutinin HPA-like | Agglutinin HPA-like | Agglutinin HPA-like |
Structural contacts of domain e2vmdA1 of H-group "Agglutinin HPA-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2vmdA2 | A:x,y,z->A:-Y,X-Y,Z | Galactose-binding domain-like | Interaction Interface Pymol |
| e2vmdA1 | A:x,y,z->A:-Y,X-Y,Z | Agglutinin HPA-like | Interaction Interface Pymol |
| e2vmdA1 | A:-Y,X-Y,Z->A:x,y,z | Agglutinin HPA-like | Interaction Interface Pymol |
| e2vmdA2 | A:x,y,z->A:X-Y-1/3,-Y+1/3,-Z+1/3 | Galactose-binding domain-like | Interaction Interface Pymol |
| e2vmdA1 | A:x,y,z->A:-X,-X+Y,-Z | Agglutinin HPA-like | Interaction Interface Pymol |
| e2vmdA1 | A:-X,-X+Y,-Z->A:x,y,z | Agglutinin HPA-like | Interaction Interface Pymol |
| e2vmdA1 | A:x,y,z->A:Y-1/3,X+1/3,-Z+1/3 | Agglutinin HPA-like | Interaction Interface Pymol |
| e2vmdA1 | A:Y-1/3,X+1/3,-Z+1/3->A:x,y,z | Agglutinin HPA-like | Interaction Interface Pymol |
