Domain ID e2vnmA2

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: Asp
UID: 001249574
Type: Automatic domain
Parent: e1dpjA3
Range: A:245-447
Ligands: CM8
PDB: 2vnm
PDB Description: BETA-SECRETASE 1
UniProt: P56817
Hsap BLAST neighbor: P56817
Species: Homo sapiens

Structure of domain e2vnmA2

Structural contacts of domain e2vnmA2 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vnmA3 A:-X+1/2,-Y,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e2vnmA3 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e2vnmA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 RIFT-related Interaction Interface Pymol
e2vnmA2 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol
e2vnmA3 A:-X+3/2,-Y,Z-1/2->A:x,y,z RIFT-related Interaction Interface Pymol
e2vnmA2 A:x,y,z->A:X-1/2,-Y-1/2,-Z+1 RIFT-related Interaction Interface Pymol
e2vnmA2 A:X-1/2,-Y-1/2,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol