Domain ID e2vnqB1

Download files:
  • A: a+b two layers
  • X: beta-Grasp
  • H: Nudix
  • T: Nudix
  • F: NUDIX
UID: 001411136
Type: Automatic domain
Parent: e1hztA1
Range: B:4-183
Ligands: IMD MN SO4
PDB: 2vnq
PDB Description: ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE
UniProt: Q46822
Hsap BLAST neighbor: Q13907
Species:

Structure of domain e2vnqB1

Domains in the same chain:

e2vnqB1 B:4-183 beta-Grasp Nudix Nudix

Domains in the same PDB:

e2vnqA1 A:31-179 beta-Grasp Nudix Nudix
e2vnqB1 B:4-183 beta-Grasp Nudix Nudix

Structural contacts of domain e2vnqB1 of H-group "Nudix":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vnqA1 B:x,y,z->A:X,Y,Z Nudix Interaction Interface Pymol
e2vnqA1 B:x,y,z->A:-X-1,Y-1/2,-Z Nudix Interaction Interface Pymol
e2vnqB1 B:x,y,z->B:-X-1,Y-1/2,-Z Nudix Interaction Interface Pymol
e2vnqB1 B:-X-1,Y-1/2,-Z->B:x,y,z Nudix Interaction Interface Pymol
e2vnqA1 B:x,y,z->A:X,Y,Z-1 Nudix Interaction Interface Pymol
e2vnqA1 B:x,y,z->A:X-1,Y,Z-1 Nudix Interaction Interface Pymol
e2vnqA1 B:x,y,z->A:-X,Y-1/2,-Z Nudix Interaction Interface Pymol
e2vnqB1 B:x,y,z->B:X-1,Y,Z Nudix Interaction Interface Pymol
e2vnqB1 B:X-1,Y,Z->B:x,y,z Nudix Interaction Interface Pymol