ECOD: domain e2vpoA1

Domain ID e2vpoA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: DctP

UID:	001874922
Type:	Automatic domain
Parent:	e3gyyA1
Range:	A:1-120,A:210-311
Ligands:	6CS MG
PDB:	2vpo
PDB Description:	PERIPLASMIC SUBSTRATE BINDING PROTEIN
UniProt:	E1VBK1
Species:	Halomonas elongata

Domains in the same chain:

Download Pymol

e2vpoA1	A:1-120,A:210-311	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2vpoA2	A:121-209	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e2vpoA1	A:1-120,A:210-311	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2vpoA2	A:121-209	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2vpoB2	B:1-120,B:210-311	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e2vpoB1	B:121-209	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e2vpoA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vpoB2	A:x,y,z->B:X,Y-1,Z+1	Periplasmic binding protein-like II	Interaction Interface Pymol
e2vpoB2	A:X,Y,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2vpoA1	A:x,y,z->A:X,Y-1,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2vpoA1	A:X,Y-1,Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2vpoB2	A:X,Y,Z-1->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2vpoB2	A:x,y,z->B:X,Y-1,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2vpoA2	A:x,y,z->A:X-1,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e2vpoA2	A:x,y,z->A:X-1,Y+1,Z	Periplasmic binding protein-like II	Interaction Interface Pymol