Domain ID e2vqtB1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Galactose-binding domain-like
  • T: Galactose-binding domain-like
  • F: Glyco_hydro_2_N2
UID: 000030540
Type: Automatic domain
Parent: e2je8A1
Range: B:28-219
Ligands: 15A BR CL EDO
PDB: 2vqt
PDB Description: BETA-MANNOSIDASE
UniProt: Q8AAK6
Hsap BLAST neighbor: O00462
Species: Bacteroides thetaiotaomicron

Structure of domain e2vqtB1

Domains in the same chain:

Download Pymol

e2vqtB1 B:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vqtB2 B:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vqtB5 B:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vqtB4 B:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vqtB3 B:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2vqtA1 A:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vqtA2 A:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vqtA5 A:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vqtA4 A:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vqtA3 A:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vqtB1 B:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vqtB2 B:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vqtB5 B:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vqtB4 B:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vqtB3 B:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vqtB1 of H-group "Galactose-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vqtA1 B:x,y,z->A:X-1,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e2vqtA5 B:x,y,z->A:X-1,Y,Z TIM barrels Interaction Interface Pymol
e2vqtA4 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol