Domain ID e2vr4B1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Galactose-binding domain-like
  • T: Galactose-binding domain-like
  • F: Glyco_hydro_2_N2
UID: 000030545
Type: Automatic domain
Parent: e2je8A1
Range: B:28-219
Ligands: 17B BR CL EDO
PDB: 2vr4
PDB Description: BETA-MANNOSIDASE
UniProt: Q8AAK6
Hsap BLAST neighbor: O00462
Species:

Structure of domain e2vr4B1

Domains in the same chain:

Download Pymol

e2vr4B1 B:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vr4B2 B:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vr4B5 B:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vr4B4 B:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vr4B3 B:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2vr4A1 A:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vr4A2 A:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vr4A5 A:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vr4A4 A:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vr4A3 A:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vr4B1 B:28-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e2vr4B2 B:220-330 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vr4B5 B:331-678 TIM beta/alpha-barrel TIM barrels TIM barrels
e2vr4B4 B:679-783 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vr4B3 B:784-864 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vr4B1 of H-group "Galactose-binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vr4A5 B:x,y,z->A:X-1,Y,Z TIM barrels Interaction Interface Pymol
e2vr4A1 B:x,y,z->A:X-1,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e2vr4A4 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol