Domain ID e2vrkB2

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Alpha-L-AF_C,ASD1_dom
UID: 000344733
Type: Automatic domain
Parent: e2vrkA2
Range: B:13-376
Ligands: PO4
PDB: 2vrk
PDB Description: ALPHA-L-ARABINOFURANOSIDASE
UniProt: O69262
Species: Thermobacillus xylanilyticus

Structure of domain e2vrkB2

Structural contacts of domain e2vrkB2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vrkA2 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e2vrkC2 B:X,Y,Z->C:x,y,z TIM barrels Interaction Interface Pymol
e2vrkB1 B:x,y,z->B:-X,-X+Y,-Z+1/3 Glycosyl hydrolase domain Interaction Interface Pymol
e2vrkB2 B:x,y,z->B:-X,-X+Y,-Z+1/3 TIM barrels Interaction Interface Pymol
e2vrkB2 B:-X,-X+Y,-Z+1/3->B:x,y,z TIM barrels Interaction Interface Pymol
e2vrkB1 B:-X,-X+Y,-Z+1/3->B:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol
e2vrkA2 B:X-Y,X,Z-1/6->A:x,y,z TIM barrels Interaction Interface Pymol
e2vrkA1 B:X-Y,X,Z-1/6->A:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol