ECOD: domain e2vs1A2

Domain ID e2vs1A2

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: S-adenosyl-L-methionine-dependent methyltransferases
F: tRNA_U5-meth_tr

UID:	000346615
Type:	Automatic domain
Parent:	e1uwvA4
Range:	A:66-405
Ligands:	PO4 SAH
PDB:	2vs1
PDB Description:	UNCHARACTERIZED RNA METHYLTRANSFERASE PYRAB10780
UniProt:	Q9UZR7
Hsap BLAST neighbor:	Q8IZ69
Species:	Pyrococcus abyssi

Domains in the same chain:

Download Pymol

e2vs1A1	A:-2-57	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2vs1A2	A:66-405	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Domains in the same PDB:

e2vs1A1	A:-2-57	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2vs1A2	A:66-405	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases

Structural contacts of domain e2vs1A2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vs1A2	A:x,y,z->A:-X+1,Y,-Z+1	Rossmann-related	Interaction Interface Pymol
e2vs1A2	A:-X+1,Y,-Z+1->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e2vs1A1	A:-X+1/2,Y-1/2,-Z->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2vs1A2	A:x,y,z->A:X,Y,Z-1	Rossmann-related	Interaction Interface Pymol
e2vs1A1	A:X,Y,Z-1->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2vs1A2	A:X,Y,Z-1->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e2vs1A1	A:x,y,z->A:-X,Y,-Z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2vs1A1	A:-X,Y,-Z->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2vs1A2	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	Rossmann-related	Interaction Interface Pymol
e2vs1A2	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	Rossmann-related	Interaction Interface Pymol