ECOD: domain e2vsfA3

Domain ID e2vsfA3

A: a+b two layers
X: XPD arch domain
H: XPD arch domain
T: XPD arch domain
F: HBB

UID:	001105359
Type:	Automatic and representative domain
Range:	A:226-364
Ligands:	CA
PDB:	2vsf
PDB Description:	DNA REPAIR HELICASE RAD3 RELATED PROTEIN
UniProt:	Q9HM14
Species:	Thermoplasma acidophilum

Domain
In chain context
In PDB context

Structure of domain e2vsfA3

Domains in the same chain:

Download Pymol

e2vsfA2	A:23-225,A:365-406	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2vsfA3	A:226-364	XPD arch domain	XPD arch domain	XPD arch domain
e2vsfA4	A:407-615	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2vsfA2	A:23-225,A:365-406	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2vsfA3	A:226-364	XPD arch domain	XPD arch domain	XPD arch domain
e2vsfA4	A:407-615	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2vsfA3 of H-group "XPD arch domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vsfA2	A:X-Y+1,X+1,Z-1/6->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2vsfA4	A:X-Y,X,Z-1/6->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2vsfA2	A:-Y,X-Y+1,Z-1/3->A:x,y,z	P-loop domains-related	Interaction Interface Pymol