Domain ID e2vycC8

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  • A: a/b three-layered sandwiches
  • X: Flavodoxin-like
  • H: Class I glutamine amidotransferase-like
  • T: CheY-like
  • F: OKR_DC_1_N
UID: 001180394
Type: Automatic domain
Parent: e1c4kA3
Range: C:1-136
PDB: 2vyc
PDB Description: BIODEGRADATIVE ARGININE DECARBOXYLASE
UniProt: P28629
Species:

Structure of domain e2vycC8

Domains in the same chain:

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e2vycC8 C:1-136 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycC5 C:137-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycC6 C:440-604 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycC7 C:605-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase

Domains in the same PDB:

e2vycA6 A:1-136 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycA5 A:137-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycA2 A:440-606 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycA3 A:607-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycB8 B:1-137 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycB5 B:138-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycB6 B:440-604 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycB7 B:605-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycC8 C:1-136 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycC5 C:137-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycC6 C:440-604 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycC7 C:605-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycD6 D:1-136 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycD5 D:137-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycD2 D:440-606 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycD1 D:607-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycE6 E:1-136 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycE5 E:137-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycE2 E:440-606 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycE1 E:607-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycF6 F:1-137 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycF5 F:138-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycF2 F:440-606 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycF1 F:607-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycG8 G:1-136 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycG5 G:137-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycG6 G:440-604 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycG7 G:605-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycH8 H:1-137 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycH5 H:138-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycH6 H:440-604 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycH7 H:605-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycI6 I:1-137 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycI5 I:138-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycI2 I:440-606 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycI1 I:607-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e2vycJ6 J:1-137 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e2vycJ5 J:138-439 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2vycJ2 J:440-606 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2vycJ1 J:607-755 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase

Structural contacts of domain e2vycC8 of H-group "Class I glutamine amidotransferase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vycA5 C:x,y,z->A:-X+1,-Y,Z PLP-dependent transferases Interaction Interface Pymol
e2vycB6 C:x,y,z->B:X,Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e2vycB8 C:x,y,z->B:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e2vycD6 C:X,Y,Z->D:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e2vycB5 C:x,y,z->B:-X+1,-Y,Z PLP-dependent transferases Interaction Interface Pymol