ECOD: domain e2vyfB1

Domain ID e2vyfB1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: DnaB_C

UID:	001312450
Type:	Manual and representative domain
Range:	B:1158-1426
Ligands:	AU
PDB:	2vyf
PDB Description:	REPLICATIVE DNA HELICASE
UniProt:	Q5KU75
Species:

Domain
In chain context
In PDB context

Structure of domain e2vyfB1

Domains in the same chain:

Download Pymol

e2vyfB2	B:1007-1155	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e2vyfB1	B:1158-1426	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e2vyfA2	A:8-156	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e2vyfA1	A:161-436	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2vyfB2	B:1007-1155	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related	DnaB helicase N-terminal domain-related
e2vyfB1	B:1158-1426	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e2vyfB1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2vyfA2	B:-Y+1,X-Y,Z->A:x,y,z	DnaB helicase N-terminal domain-related	Interaction Interface Pymol
e2vyfA1	B:-Y+1,X-Y,Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e2vyfA1	B:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2vyfA2	B:x,y,z->A:-X+1,-Y+1,Z-1/2	DnaB helicase N-terminal domain-related	Interaction Interface Pymol