Domain ID e2vyrH1

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: V-set
UID: 000353096
Type: Automatic domain
Parent: e1zvoC1
Range: H:1-125
Ligands: SO4
PDB: 2vyr
PDB Description: HUMAN SINGLE DOMAIN ANTIBODY
Hsap BLAST neighbor: P01764
Species: Homo sapiens

Structure of domain e2vyrH1

Domains in the same chain:

e2vyrH1 H:1-125 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2vyrA1 A:25-110 SWIB/MDM2 domain SWIB/MDM2 domain SWIB/MDM2 domain
e2vyrB1 B:25-110 SWIB/MDM2 domain SWIB/MDM2 domain SWIB/MDM2 domain
e2vyrC1 C:25-110 SWIB/MDM2 domain SWIB/MDM2 domain SWIB/MDM2 domain
e2vyrD1 D:25-110 SWIB/MDM2 domain SWIB/MDM2 domain SWIB/MDM2 domain
e2vyrE1 E:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vyrF1 F:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vyrG1 G:1-123 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vyrH1 H:1-125 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vyrI1 I:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vyrJ1 J:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vyrK1 K:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2vyrL1 L:1-124 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2vyrH1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2vyrD1 H:x,y,z->D:X,Y,Z SWIB/MDM2 domain Interaction Interface Pymol
e2vyrK1 H:-X-1,Y-1/2,-Z+1->K:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2vyrF1 H:x,y,z->F:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2vyrI1 H:x,y,z->I:X-1,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2vyrA1 H:x,y,z->A:X,Y,Z SWIB/MDM2 domain Interaction Interface Pymol
e2vyrE1 H:-X,Y-1/2,-Z+1->E:x,y,z Immunoglobulin-related Interaction Interface Pymol