Domain ID e2w3rE2

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  • A: a+b two layers
  • X: FAD-linked reductases, C-terminal domain-like
  • H: SufE/NifU
  • T: SufE/NifU
  • F: CO_deh_flav_C
UID: 001641147
Type: Automatic domain
Parent: e1jroA3
Range: E:346-462
Ligands: FAD
PDB: 2w3r
PDB Description: XANTHINE DEHYDROGENASE
UniProt: O54050
Species: Rhodobacter capsulatus

Structure of domain e2w3rE2

Domains in the same chain:

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e2w3rE4 E:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3rE3 E:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3rE1 E:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3rE2 E:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU

Domains in the same PDB:

e2w3rA4 A:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3rA3 A:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3rA1 A:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3rA2 A:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3rB2 B:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3rB4 B:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3rB3 B:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3rC4 C:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3rC3 C:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3rC1 C:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3rC2 C:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3rD3 D:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3rD4 D:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3rD2 D:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3rE4 E:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3rE3 E:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3rE1 E:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3rE2 E:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3rF3 F:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3rF4 F:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3rF2 F:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3rG4 G:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3rG3 G:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3rG1 G:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3rG2 G:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3rH3 H:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3rH4 H:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3rH2 H:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e2w3rE2 of H-group "SufE/NifU":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2w3rF2 E:X,Y,Z->F:x,y,z MocoBD/DmpA-related Interaction Interface Pymol
e2w3rD3 E:X-1,Y-1,Z-1->D:x,y,z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol