Domain ID e2w3sH4

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  • A: a+b two layers
  • X: MocoBD/DmpA-related
  • H: MocoBD/DmpA-related
  • T: Molybdenum cofactor-binding domain
  • F: MoCoBD_1
UID: 001874964
Type: Automatic domain
Parent: e1v97A7
Range: H:125-377
Ligands: CA FES MOM MTE XAN
PDB: 2w3s
PDB Description: XANTHINE DEHYDROGENASE
UniProt: O54051
Hsap BLAST neighbor: P47989
Species: Rhodobacter capsulatus

Structure of domain e2w3sH4

Domains in the same chain:

e2w3sH3 H:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3sH4 H:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sH2 H:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e2w3sA4 A:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3sA3 A:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3sA1 A:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3sA2 A:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3sB3 B:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3sB4 B:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sB2 B:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sC4 C:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3sC3 C:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3sC1 C:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3sC2 C:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3sD3 D:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3sD4 D:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sD2 D:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sE4 E:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3sE3 E:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3sE1 E:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3sE2 E:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3sF3 F:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3sF4 F:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sF2 F:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sG4 G:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w3sG3 G:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w3sG1 G:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w3sG2 G:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w3sH3 H:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w3sH4 H:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w3sH2 H:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e2w3sH4 of H-group "MocoBD/DmpA-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2w3sG4 H:x,y,z->G:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e2w3sG1 H:x,y,z->G:X,Y,Z FAD-binding domain Interaction Interface Pymol
e2w3sG3 H:x,y,z->G:X,Y,Z CO dehydrogenase ISP C-domain like Interaction Interface Pymol
e2w3sF3 H:x,y,z->F:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2w3sF4 H:x,y,z->F:X,Y,Z MocoBD/DmpA-related Interaction Interface Pymol
e2w3sF2 H:x,y,z->F:X,Y,Z MocoBD/DmpA-related Interaction Interface Pymol
e2w3sD2 H:X,Y-1,Z->D:x,y,z MocoBD/DmpA-related Interaction Interface Pymol