Domain ID e2w54H2

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: CO dehydrogenase molybdoprotein N-domain-like
  • F: Ald_Xan_dh_C
UID: 000354666
Type: Automatic domain
Parent: e1vlbA4
Range: H:2-125
PDB: 2w54
PDB Description: XANTHINE DEHYDROGENASE
UniProt: O54051
Hsap BLAST neighbor: Q06278
Species: Rhodobacter capsulatus

Structure of domain e2w54H2

Domains in the same chain:

e2w54H2 H:2-125 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w54H4 H:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54H3 H:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e2w54A4 A:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w54A3 A:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w54A1 A:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w54A2 A:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w54B3 B:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w54B4 B:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54B2 B:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54C4 C:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w54C3 C:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w54C1 C:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w54C2 C:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w54D3 D:2-124 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w54D4 D:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54D2 D:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54E4 E:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w54E3 E:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w54E1 E:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w54E2 E:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w54F2 F:2-125 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w54F4 F:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54F3 F:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54G4 G:1-84 beta-Grasp Ubiquitin-related Ubiquitin-like
e2w54G3 G:85-166 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e2w54G1 G:179-345 FAD-binding domain-like FAD-binding domain FAD-binding domain
e2w54G2 G:346-462 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e2w54H2 H:2-125 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e2w54H4 H:125-377 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e2w54H3 H:378-777 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e2w54H2 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2w54G1 H:x,y,z->G:X,Y,Z FAD-binding domain Interaction Interface Pymol
e2w54G4 H:x,y,z->G:X,Y,Z Ubiquitin-related Interaction Interface Pymol
e2w54G3 H:x,y,z->G:X,Y,Z CO dehydrogenase ISP C-domain like Interaction Interface Pymol
e2w54F2 H:x,y,z->F:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2w54F4 H:x,y,z->F:X,Y,Z MocoBD/DmpA-related Interaction Interface Pymol
e2w54D2 H:X,Y-1,Z->D:x,y,z MocoBD/DmpA-related Interaction Interface Pymol