Domain ID e2wbjE2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_II_alpha
UID: 000360669
Type: Automatic domain
Parent: e1hdmA2
Range: E:4-81
Ligands: NAG
PDB: 2wbj
PDB Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN
UniProt: P01903
Hsap BLAST neighbor: P01903
Species: Homo sapiens

Structure of domain e2wbjE2

Domains in the same chain:

e2wbjE2 E:4-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2wbjE1 E:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2wbjA2 A:3-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2wbjA1 A:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjB2 B:3-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2wbjB1 B:94-188 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjC1 C:8-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjC2 C:119-200 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjD2 D:23-141 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjD1 D:143-269 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjE2 E:4-81 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2wbjE1 E:82-180 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjF2 F:3-87 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e2wbjF1 F:95-190 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjG1 G:10-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjG2 G:119-202 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjH1 H:1-16,H:23-142 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wbjH5 H:143-268 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2wbjE2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1hdmA2 E:X,Y,Z->F:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e2wbjF1 E:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2wbjH1 E:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2wbjG1 E:X,Y,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol