Domain ID e2wiiB5

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Spermadhesin, CUB domain
  • T: Spermadhesin, CUB domain
  • F: C3_CUB2,C3_CUB1
UID: 001138174
Type: Automatic domain
Parent: e3pvmB8
Range: B:912-963,B:1270-1331
Ligands: GOL NAG
PDB: 2wii
PDB Description: COMPLEMENT C3B ALPHA' CHAIN
UniProt: P01024
Hsap BLAST neighbor: P01024
Species: Homo sapiens

Structure of domain e2wiiB5

Domains in the same chain:

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e2wiiB6 B:730-805 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiB4 B:805-911 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiB5 B:912-963,B:1270-1331 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e2wiiB1 B:964-1269 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e2wiiB3 B:1332-1480 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e2wiiB2 B:1481-1641 OB-fold TIMP-like TIMP-like

Domains in the same PDB:

e2wiiA1 A:1-103 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiA5 A:104-206 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiA6 A:205-328 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiA4 A:329-424 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiA2 A:425-537 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiA3 A:537-642 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiB6 B:730-805 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiB4 B:805-911 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2wiiB5 B:912-963,B:1270-1331 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e2wiiB1 B:964-1269 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e2wiiB3 B:1332-1480 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e2wiiB2 B:1481-1641 OB-fold TIMP-like TIMP-like
e2wiiC3 C:2-64 EGF-like EGF-related Complement control module/SCR domain
e2wiiC4 C:65-128 EGF-like EGF-related Complement control module/SCR domain
e2wiiC1 C:126-189 EGF-like EGF-related Complement control module/SCR domain
e2wiiC2 C:190-247 EGF-like EGF-related Complement control module/SCR domain

Structural contacts of domain e2wiiB5 of H-group "Spermadhesin, CUB domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wiiA5 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2wiiC1 B:X,Y,Z->C:x,y,z EGF-related Interaction Interface Pymol
e2wiiB3 B:x,y,z->B:-X+1/2,Y-1/2,-Z Immunoglobulin-related Interaction Interface Pymol
e2wiiB2 B:x,y,z->B:-X+1/2,Y-1/2,-Z TIMP-like Interaction Interface Pymol