ECOD: domain e2wk4B2

Domain ID e2wk4B2

A: a+b two layers
X: Alpha-beta plaits
H: Adenylyl and guanylyl cyclase catalytic domain-like
T: Adenylyl and guanylyl cyclase catalytic domain-like
F: RdRP_1

UID:	001875037
Type:	Automatic domain
Parent:	e1khvA2
Range:	B:1-385,B:462-502
Ligands:	GOL
PDB:	2wk4
PDB Description:	PROTEASE-POLYMERASE P70
UniProt:	Q69014
Species:	Sapporo virus

Domains in the same chain:

Download Pymol

e2wk4B2	B:1-385,B:462-502	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e2wk4B1	B:386-461	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases

Domains in the same PDB:

e2wk4A2	A:4-385,A:462-502	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e2wk4A1	A:386-461	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e2wk4B2	B:1-385,B:462-502	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e2wk4B1	B:386-461	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases

Structural contacts of domain e2wk4B2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2wk4A2	B:x,y,z->A:X,Y,Z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e2wk4A1	B:x,y,z->A:X,Y,Z	helical bundle domain in reverse transcriptase-like polymerases	Interaction Interface Pymol
e2wk4A1	B:x,y,z->A:-X+1/2,Y-1/2,-Z+1/4	helical bundle domain in reverse transcriptase-like polymerases	Interaction Interface Pymol
e2wk4A2	B:x,y,z->A:-X+1/2,Y-1/2,-Z+1/4	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e2wk4A2	B:-Y+1/2,X-1/2,Z+1/4->A:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e2wk4B2	B:x,y,z->B:-Y,-X,-Z-1/2	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e2wk4B1	B:x,y,z->B:-Y,-X,-Z-1/2	helical bundle domain in reverse transcriptase-like polymerases	Interaction Interface Pymol
e2wk4B1	B:-Y,-X,-Z-1/2->B:x,y,z	helical bundle domain in reverse transcriptase-like polymerases	Interaction Interface Pymol
e2wk4B2	B:-Y,-X,-Z-1/2->B:x,y,z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol