Domain ID e2wk6A3

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  • A: a/b three-layered sandwiches
  • X: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • H: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • T: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
  • F: Glycos_transf_3
UID: 000367344
Type: Automatic domain
Parent: e1brwA3
Range: A:103-373
Ligands: IUR
PDB: 2wk6
PDB Description: THYMIDINE PHOSPHORYLASE
UniProt: P19971
Hsap BLAST neighbor: P19971
Species: Homo sapiens

Structure of domain e2wk6A3

Domains in the same chain:

e2wk6A1 A:35-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2wk6A3 A:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2wk6A2 A:374-481 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Domains in the same PDB:

e2wk6A1 A:35-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2wk6A3 A:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2wk6A2 A:374-481 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain
e2wk6B1 B:35-102 Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N Nucleoside phosphorylase/phosphoribosyltransferase-N
e2wk6B3 B:103-373 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
e2wk6B2 B:374-481 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Pyrimidine nucleoside phosphorylase C-terminal domain

Structural contacts of domain e2wk6A3 of H-group "Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wk6B1 A:X,Y,Z->B:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase-N Interaction Interface Pymol
e2wk6B3 A:x,y,z->B:-X,Y-1/2,-Z+1/2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain Interaction Interface Pymol
e2wk6B2 A:x,y,z->B:-X,Y-1/2,-Z+1/2 alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2wk6A2 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e2wk6B1 A:-X+1,Y-1/2,-Z+1/2->B:x,y,z Nucleoside phosphorylase/phosphoribosyltransferase-N Interaction Interface Pymol