Domain ID e2womB7

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  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RVT_thumb
UID: 001257217
Type: Automatic domain
Parent: e2zd1B1
Range: B:231-304
PDB: 2wom
PDB Description: HIV-1 REVERSE TRANSCRIPTASE
UniProt: P04585
Species: Human immunodeficiency virus 1

Structure of domain e2womB7

Domains in the same chain:

e2womB9 B:3-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2womB7 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2womB8 B:305-430 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e2womA8 A:1-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2womA7 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2womA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e2womA6 A:429-558 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e2womB9 B:3-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e2womB7 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e2womB8 B:305-430 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e2womB7 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2womA6 B:x,y,z->A:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e2womA8 B:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2womA6 B:x,y,z->A:-X,Y,-Z+1/2 Ribonuclease H-like Interaction Interface Pymol
e2womB7 B:x,y,z->B:X,-Y+1,-Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e2womB7 B:X,-Y+1,-Z->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol