Domain ID e2wp9J1

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  • A: alpha arrays
  • X: alpha-helical ferredoxin-like
  • H: alpha-helical ferredoxin
  • T: alpha-helical ferredoxin
  • F: Fer4_8
UID: 000398928
Type: Automatic domain
Parent: e2bs2B1
Range: J:107-238
Ligands: CBE F3S HEM SF4
PDB: 2wp9
PDB Description: SUCCINATE DEHYDROGENASE IRON-SULFUR SUBUNIT
UniProt: P07014
Hsap BLAST neighbor: P21912
Species: Escherichia coli

Structure of domain e2wp9J1

Domains in the same chain:

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e2wp9J2 J:1-106 beta-Grasp Ubiquitin-related Ubiquitin-like
e2wp9J1 J:107-238 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin

Domains in the same PDB:

e2wp9A3 A:1-235,A:356-450 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e2wp9A2 A:236-355 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e2wp9A4 A:451-588 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e2wp9B2 B:1-106 beta-Grasp Ubiquitin-related Ubiquitin-like
e2wp9B1 B:107-238 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e2wp9C1 C:8-129 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wp9D1 D:11-115 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wp9E2 E:1-236,E:366-442 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e2wp9E3 E:236-365 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e2wp9E1 E:443-588 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e2wp9F2 F:1-106 beta-Grasp Ubiquitin-related Ubiquitin-like
e2wp9F1 F:107-238 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e2wp9G1 G:8-129 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wp9H1 H:11-115 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wp9I2 I:1-236,I:366-442 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e2wp9I3 I:236-365 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e2wp9I1 I:443-588 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e2wp9J2 J:1-106 beta-Grasp Ubiquitin-related Ubiquitin-like
e2wp9J1 J:107-238 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e2wp9K1 K:8-129 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wp9L1 L:11-115 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e2wp9J1 of H-group "alpha-helical ferredoxin":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wp9I2 J:x,y,z->I:X,Y,Z Rossmann-related Interaction Interface Pymol
e2wp9I3 J:x,y,z->I:X,Y,Z Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Interaction Interface Pymol
e2wp9K1 J:X,Y,Z->K:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2wp9L1 J:X,Y,Z->L:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2wp9A3 J:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e2wp9D1 J:X,Y,Z->D:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2wp9F1 J:x,y,z->F:X,Y,Z alpha-helical ferredoxin Interaction Interface Pymol