Domain ID e2wqyD3

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  • A: alpha bundles
  • X: Transmembrane heme-binding four-helical bundle
  • H: Transmembrane heme-binding four-helical bundle
  • T: Fumarate reductase respiratory complex transmembrane subunits
  • F: CybS
UID: 001223786
Type: Automatic domain
Parent: e3sfdD1
Range: D:3-103
Ligands: CBE GOL HEM PEE UNL
PDB: 2wqy
PDB Description: SUCCINATE DEHYDROGENASE CYTOCHROME B, SMALL SUBUNIT
UniProt: Q5ZIS0
Hsap BLAST neighbor: O14521
Species: Gallus gallus

Structure of domain e2wqyD3

Domains in the same chain:

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e2wqyD3 D:3-103 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Domains in the same PDB:

e2wqyA1 A:9-246,A:376-461 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e2wqyA3 A:247-375 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e2wqyA2 A:462-621 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e2wqyB2 B:8-114 beta-Grasp Ubiquitin-related Ubiquitin-like
e2wqyB1 B:115-246 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e2wqyC1 C:2-141 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wqyD3 D:3-103 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wqyN1 N:10-246,N:376-461 Rossmann-like Rossmann-related FAD/NAD(P)-binding domain
e2wqyN2 N:247-375 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
e2wqyN3 N:462-621 Spectrin repeat-like Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
e2wqyO2 O:8-114 beta-Grasp Ubiquitin-related Ubiquitin-like
e2wqyO1 O:115-246 alpha-helical ferredoxin-like alpha-helical ferredoxin alpha-helical ferredoxin
e2wqyP1 P:2-141 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits
e2wqyQ1 Q:3-103 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Fumarate reductase respiratory complex transmembrane subunits

Structural contacts of domain e2wqyD3 of H-group "Transmembrane heme-binding four-helical bundle":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2wqyC1 D:x,y,z->C:X,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2wqyB1 D:x,y,z->B:X,Y,Z alpha-helical ferredoxin Interaction Interface Pymol