Domain ID e2x2dD1

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 000387379
Type: Automatic domain
Parent: e2pxrC1
Range: D:1-146
PDB: 2x2d
PDB Description: CAPSID PROTEIN P24
UniProt: P12497
Species: Human immunodeficiency virus 1

Structure of domain e2x2dD1

Structural contacts of domain e2x2dD1 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2x2dE1 D:X-1,Y,Z->E:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e2x2dC1 D:x,y,z->C:X,Y,Z Cyclophilin-like Interaction Interface Pymol
e2x2dE1 D:X,Y,Z->E:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e2x2dB1 D:x,y,z->B:-X,Y-1/2,-Z Cyclophilin-like Interaction Interface Pymol
e2x2dC1 D:X-1,Y,Z-1->C:x,y,z Cyclophilin-like Interaction Interface Pymol
e2x2dD1 D:x,y,z->D:X-1,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e2x2dD1 D:X-1,Y,Z->D:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e2x2dB1 D:x,y,z->B:-X+1,Y-1/2,-Z Cyclophilin-like Interaction Interface Pymol
e2x2dC1 D:X-1,Y,Z->C:x,y,z Cyclophilin-like Interaction Interface Pymol
e2x2dB1 D:X,Y,Z-1->B:x,y,z Cyclophilin-like Interaction Interface Pymol