ECOD: domain e2x5oA1

Domain ID e2x5oA1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: MurCD/PglD N-terminal domain-like
F: MurD-like_N

UID:	000400716
Type:	Automatic domain
Parent:	e2jfgA1
Range:	A:1-93
Ligands:	CL SO3 VSV
PDB:	2x5o
PDB Description:	UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE
UniProt:	P14900
Species:

Domain
In chain context
In PDB context

Structure of domain e2x5oA1

Domains in the same chain:

Download Pymol

e2x5oA1	A:1-93	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e2x5oA2	A:94-293	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2x5oA3	A:294-439	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e2x5oA1	A:1-93	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e2x5oA2	A:94-293	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2x5oA3	A:294-439	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e2x5oA1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2x5oA3	A:x,y,z->A:X-1,Y,Z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e2x5oA2	A:x,y,z->A:-Y,X+1,Z+1/4	P-loop domains-related	Interaction Interface Pymol
e2x5oA3	A:-Y+1,X+1,Z+1/4->A:x,y,z	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol