ECOD: domain e2xasA5

Domain ID e2xasA5

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: FAD/NAD(P)-binding domain
F: Amino_oxidase

UID:	001270795
Type:	Automatic domain
Parent:	e1b5qA2
Range:	A:274-639,A:747-836
Ligands:	FAD M80
PDB:	2xas
PDB Description:	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1
UniProt:	O60341
Hsap BLAST neighbor:	O60341
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e2xasA6	A:171-273	HTH	HTH	tri-helical
e2xasA5	A:274-639,A:747-836	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2xasA4	A:640-746	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C

Domains in the same PDB:

e2xasA6	A:171-273	HTH	HTH	tri-helical
e2xasA5	A:274-639,A:747-836	Rossmann-like	Rossmann-related	FAD/NAD(P)-binding domain
e2xasA4	A:640-746	FAD-linked reductases, C-terminal domain-like	FAD-linked reductases-C	FAD-linked reductases-C
e2xasB2	B:308-375	Helical region in REST corepressor 1	Helical region in REST corepressor 1	Helical region in REST corepressor 1
e2xasB3	B:376-440	HTH	HTH	tri-helical

Structural contacts of domain e2xasA5 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2xasB2	A:X,Y,Z->B:x,y,z	Helical region in REST corepressor 1	Interaction Interface Pymol
e2xasB2	A:X,Y,Z->B:x,y,z	Helical region in REST corepressor 1	Interaction Interface Pymol
e2xasA5	A:x,y,z->A:-X,Y,-Z+1	Rossmann-related	Interaction Interface Pymol
e2xasA5	A:-X,Y,-Z+1->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e2xasA5	A:x,y,z->A:-X,-Y+1,Z	Rossmann-related	Interaction Interface Pymol
e2xasA5	A:-X,-Y+1,Z->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e2xasB2	A:x,y,z->B:X-1/2,-Y+1/2,-Z+1/2	Helical region in REST corepressor 1	Interaction Interface Pymol
e2xasA5	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2	Rossmann-related	Interaction Interface Pymol
e2xasA4	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2	FAD-linked reductases-C	Interaction Interface Pymol
e2xasA5	A:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z	Rossmann-related	Interaction Interface Pymol