ECOD: domain e2xb2D1

Domain ID e2xb2D1

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_1

UID:	000139222
Type:	Automatic domain
Parent:	e1h2vZ1
Range:	D:66-154
PDB:	2xb2
PDB Description:	RNA-BINDING PROTEIN 8A
UniProt:	Q9Y5S9
Hsap BLAST neighbor:	Q9Y5S9
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2xb2D1

Domains in the same chain:

Download Pymol

e2xb2D1	D:66-154	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e2xb2A2	A:22-242	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2xb2A1	A:243-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2xb2C1	C:4-146	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2xb2D1	D:66-154	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e2xb2X2	X:22-242	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2xb2X1	X:243-411	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e2xb2Y1	Y:4-146	Mago nashi protein	Mago nashi protein	Mago nashi protein
e2xb2Z1	Z:66-154	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e2xb2D1 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2xb2C1	D:x,y,z->C:X,Y,Z	Mago nashi protein	Interaction Interface Pymol
e2xb2X2	D:x,y,z->X:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e2xb2A1	D:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol