| UID: | 000408909 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2pxrC1 |
| Range: | B:1-146 |
| Ligands: | 1B0 |
| PDB: | 2xde |
| PDB Description: | GAG POLYPROTEIN |
| UniProt: | P12497 |
| Species: | Human immunodeficiency virus 1 |
Structure of domain e2xdeB1
Domains in the same chain:
| e2xdeB1 | B:1-146 | Retrovirus capsid protein | Retrovirus capsid protein N-terminal domain | Retrovirus capsid protein N-terminal domain |
Domains in the same PDB:
Structural contacts of domain e2xdeB1 of H-group "Retrovirus capsid protein N-terminal domain":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2xdeA1 | B:-X+1,Y-1/2,-Z+1->A:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeA1 | B:-X+1,Y-1/2,-Z->A:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeA1 | B:x,y,z->A:X,Y,Z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeA1 | B:X-1,Y,Z->A:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeB1 | B:x,y,z->B:X-1,Y,Z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeB1 | B:X-1,Y,Z->B:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeA1 | B:X-1,Y,Z+1->A:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeA1 | B:x,y,z->A:X,Y,Z-1 | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeA1 | B:-X,Y-1/2,-Z->A:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeA1 | B:-X,Y-1/2,-Z+1->A:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeB1 | B:x,y,z->B:X,Y,Z-1 | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
| e2xdeB1 | B:X,Y,Z-1->B:x,y,z | Retrovirus capsid protein N-terminal domain | Interaction Interface Pymol |
