Domain ID e2xexB8

Download files:
  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: EFG_IV
UID: 001231459
Type: Automatic domain
Parent: e2dy1A4
Range: B:482-598
PDB: 2xex
PDB Description: ELONGATION FACTOR G
UniProt: P68790
Hsap BLAST neighbor: Q96RP9
Species: Staphylococcus aureus

Structure of domain e2xexB8

Domains in the same chain:

Download Pymol

e2xexB6 B:2-282 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xexB7 B:283-401 cradle loop barrel RIFT-related Alanine racemase-C
e2xexB9 B:402-481 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2xexB8 B:482-598 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2xexB3 B:599-693 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e2xexA9 A:2-36,A:65-282 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xexA7 A:283-400 cradle loop barrel RIFT-related Alanine racemase-C
e2xexA8 A:401-474 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2xexA10 A:475-584 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2xexA6 A:585-693 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2xexB6 B:2-282 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xexB7 B:283-401 cradle loop barrel RIFT-related Alanine racemase-C
e2xexB9 B:402-481 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e2xexB8 B:482-598 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e2xexB3 B:599-693 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Structural contacts of domain e2xexB8 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2xexA7 B:x,y,z->A:-X+2,Y-1/2,-Z+1 RIFT-related Interaction Interface Pymol
e2xexA10 B:x,y,z->A:X,Y-1,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol