Domain ID e2xokD2

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab
UID: 000140669
Type: Automatic domain
Parent: e2jdiA3
Range: D:83-357
Ligands: ANP MG
PDB: 2xok
PDB Description: ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL
UniProt: P00830
Hsap BLAST neighbor: P06576
Species: Saccharomyces cerevisiae

Structure of domain e2xokD2

Domains in the same chain:

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e2xokD1 D:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e2xokD2 D:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xokD3 D:358-476 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e2xokA1 A:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e2xokA3 A:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xokA2 A:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2xokB1 B:25-96 cradle loop barrel RIFT-related Alanine racemase-C
e2xokB3 B:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xokB2 B:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2xokC1 C:26-96 cradle loop barrel RIFT-related Alanine racemase-C
e2xokC3 C:97-381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xokC2 C:382-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2xokD1 D:6-82 cradle loop barrel RIFT-related Alanine racemase-C
e2xokD2 D:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xokD3 D:358-476 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2xokE1 E:8-82 cradle loop barrel RIFT-related Alanine racemase-C
e2xokE4 E:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xokE5 E:358-476 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2xokF1 F:7-82 cradle loop barrel RIFT-related Alanine racemase-C
e2xokF4 F:83-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2xokF5 F:358-476 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2xokG1 G:1-277 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit
e2xokH1 H:12-94 Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N
e2xokH2 H:95-136 Long alpha-hairpin Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain
e2xokI1 I:8-61 Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase Epsilon subunit of mitochondrial F1F0-ATP synthase
e2xokK1 K:3-75 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokL1 L:2-73 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokM1 M:1-73 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokN1 N:1-73 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokO1 O:1-74 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokP1 P:1-75 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokQ1 Q:1-75 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokR1 R:1-74 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokS1 S:1-74 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C
e2xokT1 T:2-74 F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C F1F0 ATP synthase subunit C

Structural contacts of domain e2xokD2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2xokC3 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e2xokC2 D:x,y,z->C:X,Y,Z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e2xokA3 D:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e2xokA1 D:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e2xokG1 D:X,Y,Z->G:x,y,z ATP synthase (F1-ATPase), gamma subunit Interaction Interface Pymol