Domain ID e2xpkB1

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  • A: alpha bundles
  • X: Hyaluronidase domain-like
  • H: Hyaluronidase post-catalytic domain-like
  • T: Hyaluronidase post-catalytic domain-like
  • F: NagJ_C
UID: 000415300
Type: Automatic domain
Parent: e2cbiA1
Range: B:496-624
Ligands: Z0M
PDB: 2xpk
PDB Description: O-GLCNACASE NAGJ
UniProt: Q0TR53
Species: Clostridium perfringens

Structure of domain e2xpkB1

Structural contacts of domain e2xpkB1 of H-group "Hyaluronidase post-catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2xpkA2 B:x,y,z->A:X,Y,Z TIM barrels Interaction Interface Pymol
e2xpkB1 B:x,y,z->B:-X,-Y+1/2,Z Hyaluronidase post-catalytic domain-like Interaction Interface Pymol
e2xpkB1 B:-X,-Y+1/2,Z->B:x,y,z Hyaluronidase post-catalytic domain-like Interaction Interface Pymol
e2xpkA2 B:x,y,z->A:X,-Y,-Z+1/2 TIM barrels Interaction Interface Pymol
e2xpkA2 B:-X,Y-1/2,-Z+1/2->A:x,y,z TIM barrels Interaction Interface Pymol