Domain ID e2xwbF4

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  • A: few secondary structure elements
  • X: EGF-like
  • H: EGF-related
  • T: Complement control module/SCR domain
  • F: Sushi
UID: 000410139
Type: Automatic domain
Parent: e2q7zA12
Range: F:77-137
Ligands: NAG
PDB: 2xwb
PDB Description: COMPLEMENT FACTOR B
UniProt: P00751
Hsap BLAST neighbor: P00751
Species: Homo sapiens

Structure of domain e2xwbF4

Domains in the same chain:

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e2xwbF3 F:10-76 EGF-like EGF-related Complement control module/SCR domain
e2xwbF4 F:77-137 EGF-like EGF-related Complement control module/SCR domain
e2xwbF5 F:138-199 EGF-like EGF-related Complement control module/SCR domain
e2xwbF8 F:200-460 HAD domain-like HAD domain-related vWA-like
e2xwbF9 F:461-741 cradle loop barrel RIFT-related FMN-binding split barrel 2

Domains in the same PDB:

e2xwbA1 A:1-103 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbA2 A:104-206 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbA5 A:205-328 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbA4 A:329-424 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbA6 A:425-537 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbA3 A:537-642 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbB6 B:730-805 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbB4 B:805-911 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbB5 B:912-963,B:1270-1331 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e2xwbB1 B:964-1269 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e2xwbB3 B:1332-1480 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e2xwbB2 B:1481-1641 OB-fold TIMP-like TIMP-like
e2xwbC2 C:1-103 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbC6 C:104-206 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbC5 C:205-328 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbC1 C:329-424 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbC3 C:425-537 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbC4 C:537-642 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbD6 D:730-805 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbD4 D:805-911 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2xwbD5 D:912-963,D:1270-1331 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e2xwbD1 D:964-1269 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e2xwbD3 D:1332-1480 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e2xwbD2 D:1481-1641 OB-fold TIMP-like TIMP-like
e2xwbF3 F:10-76 EGF-like EGF-related Complement control module/SCR domain
e2xwbF4 F:77-137 EGF-like EGF-related Complement control module/SCR domain
e2xwbF5 F:138-199 EGF-like EGF-related Complement control module/SCR domain
e2xwbF8 F:200-460 HAD domain-like HAD domain-related vWA-like
e2xwbF9 F:461-741 cradle loop barrel RIFT-related FMN-binding split barrel 2
e2xwbH3 H:10-76 EGF-like EGF-related Complement control module/SCR domain
e2xwbH4 H:77-137 EGF-like EGF-related Complement control module/SCR domain
e2xwbH5 H:138-199 EGF-like EGF-related Complement control module/SCR domain
e2xwbH8 H:200-460 HAD domain-like HAD domain-related vWA-like
e2xwbH9 H:461-741 cradle loop barrel RIFT-related FMN-binding split barrel 2
e2xwbI1 I:1-228 cradle loop barrel RIFT-related FMN-binding split barrel 2
e2xwbJ1 J:1-228 cradle loop barrel RIFT-related FMN-binding split barrel 2

Structural contacts of domain e2xwbF4 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2xwbB4 F:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2xwbB6 F:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e2xwbI1 F:X,Y,Z->I:x,y,z RIFT-related Interaction Interface Pymol
e2xwbA2 F:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol