Domain ID e2xy6A2

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  • A: alpha bundles
  • X: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • H: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • T: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • F: DNA_pol_A
UID: 000425209
Type: Automatic domain
Parent: e2hhvA2
Range: A:469-642
Ligands: MRD
PDB: 2xy6
PDB Description: DNA POLYMERASE I
UniProt: E1C9K5
Hsap BLAST neighbor: Q7Z5Q5
Species: Geobacillus stearothermophilus

Structure of domain e2xy6A2

Structural contacts of domain e2xy6A2 of H-group ""fingers" domain in bacteriophage RB69-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2xy6A3 A:x,y,z->A:-X+1/2,-Y,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e2xy6A4 A:x,y,z->A:-X+1/2,-Y,Z-1/2 Ribonuclease H-like Interaction Interface Pymol
e2xy6A1 A:-X+1/2,-Y,Z-1/2->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e2xy6A1 A:X-1/2,-Y+1/2,-Z->A:x,y,z helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol