Domain ID e2y0eB1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: UDPG_MGDP_dh_N
UID: 001260725
Type: Automatic domain
Parent: e1mv8A2
Range: B:-2-202
Ligands: ACT SO4 UGA
PDB: 2y0e
PDB Description: UDP-GLUCOSE DEHYDROGENASE
UniProt: C9E261
Hsap BLAST neighbor: O60701
Species: Burkholderia cepacia

Structure of domain e2y0eB1

Domains in the same chain:

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e2y0eB1 B:-2-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2y0eB3 B:207-302 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2y0eB2 B:303-457 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Domains in the same PDB:

e2y0eA4 A:-2-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2y0eA3 A:207-302 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2y0eA2 A:303-459 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e2y0eB1 B:-2-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2y0eB3 B:207-302 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2y0eB2 B:303-457 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e2y0eC2 C:-2-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2y0eC3 C:207-302 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2y0eC1 C:303-457 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e2y0eD2 D:-2-202 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2y0eD3 D:207-302 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e2y0eD4 D:303-458 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Structural contacts of domain e2y0eB1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y0eA3 B:x,y,z->A:X,Y,Z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e2y0eD3 B:X,Y,Z->D:x,y,z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e2y0eD4 B:X,Y,Z->D:x,y,z Rossmann-related Interaction Interface Pymol
e2y0eD3 B:x,y,z->D:-X+2,Y-1/2,-Z+1/2 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e2y0eD4 B:x,y,z->D:-X+2,Y-1/2,-Z+1/2 Rossmann-related Interaction Interface Pymol
e2y0eC2 B:X,Y,Z->C:x,y,z Rossmann-related Interaction Interface Pymol
e2y0eC3 B:x,y,z->C:-X+2,Y-1/2,-Z+1/2 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol