Domain ID e2y0pD3

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  • A: a/b three-layered sandwiches
  • X: TK C-terminal domain-like
  • H: TK C-terminal domain-like
  • T: TK C-terminal domain-like
  • F: OxoGdeHyase_C
UID: 000422414
Type: Automatic domain
Parent: e2jgdA3
Range: D:1091-1227
Ligands: ACO
PDB: 2y0p
PDB Description: 2-OXOGLUTARATE DECARBOXYLASE
UniProt: A0R2B1
Hsap BLAST neighbor: Q02218
Species:

Structure of domain e2y0pD3

Domains in the same chain:

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e2y0pD1 D:362-819 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pD2 D:820-1090 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pD3 D:1091-1227 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Domains in the same PDB:

e2y0pA1 A:361-819 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pA2 A:820-1090 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pA3 A:1091-1227 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e2y0pB1 B:365-819 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pB2 B:820-1090 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pB3 B:1091-1227 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e2y0pC1 C:364-819 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pC2 C:820-1090 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pC3 C:1091-1227 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like
e2y0pD1 D:362-819 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pD2 D:820-1090 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2y0pD3 D:1091-1227 TK C-terminal domain-like TK C-terminal domain-like TK C-terminal domain-like

Structural contacts of domain e2y0pD3 of H-group "TK C-terminal domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y0pC2 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2y0pC1 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2y0pC3 D:x,y,z->C:X,Y,Z TK C-terminal domain-like Interaction Interface Pymol
e2y0pC1 D:x,y,z->C:X-1,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol