Domain ID e2y55A2

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  • A: alpha complex topology
  • X: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • H: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • T: alpha-helical domain in beta-lactamase/transpeptidase-like proteins
  • F: Peptidase_S13
UID: 000425277
Type: Automatic domain
Parent: e2ex2A2
Range: A:45-66,A:285-353
Ligands: FP5
PDB: 2y55
PDB Description: D-ALANYL-D-ALANINE CARBOXYPEPTIDASE
UniProt: P39045
Species: Actinomadura sp. R39

Structure of domain e2y55A2

Domains in the same chain:

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e2y55A3 A:1-44,A:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y55A2 A:45-66,A:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y55A4 A:67-163,A:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y55A1 A:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Domains in the same PDB:

e2y55A3 A:1-44,A:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y55A2 A:45-66,A:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y55A4 A:67-163,A:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y55A1 A:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e2y55B3 B:1-44,B:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y55B2 B:45-66,B:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y55B4 B:67-163,B:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y55B1 B:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e2y55C3 C:1-44,C:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y55C2 C:45-66,C:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y55C4 C:67-163,C:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y55C1 C:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e2y55D3 D:1-44,D:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y55D2 D:45-66,D:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y55D4 D:67-163,D:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y55D1 D:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Structural contacts of domain e2y55A2 of H-group "alpha-helical domain in beta-lactamase/transpeptidase-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y55D2 A:x,y,z->D:X,Y-1,Z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol