Domain ID e2y59B4

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  • A: a/b three-layered sandwiches
  • X: DTD-like
  • H: Inserted a+b domain in Dac-like proteins
  • T: Inserted a+b domain in Dac-like proteins
  • F: Peptidase_S13
UID: 000425299
Type: Automatic domain
Parent: e1w79A4
Range: B:67-163,B:239-284
Ligands: SO4 ZA3
PDB: 2y59
PDB Description: D-ALANYL-D-ALANINE CARBOXYPEPTIDASE
UniProt: P39045
Species: Actinomadura sp. R39

Structure of domain e2y59B4

Domains in the same chain:

e2y59B3 B:1-44,B:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y59B2 B:45-66,B:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y59B4 B:67-163,B:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y59B1 B:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Domains in the same PDB:

e2y59A3 A:1-44,A:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y59A2 A:45-66,A:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y59A4 A:67-163,A:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y59A1 A:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e2y59B3 B:1-44,B:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y59B2 B:45-66,B:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y59B4 B:67-163,B:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y59B1 B:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e2y59C3 C:1-44,C:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y59C2 C:45-66,C:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y59C4 C:67-163,C:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y59C1 C:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins
e2y59D3 D:1-44,D:354-466 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e2y59D2 D:45-66,D:285-353 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e2y59D4 D:67-163,D:239-284 DTD-like Inserted a+b domain in Dac-like proteins Inserted a+b domain in Dac-like proteins
e2y59D1 D:164-238 Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins Inserted beta sandwich domain in Dac-like proteins

Structural contacts of domain e2y59B4 of H-group "Inserted a+b domain in Dac-like proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2y59C1 B:x,y,z->C:-X+1,Y-1/2,-Z Inserted beta sandwich domain in Dac-like proteins Interaction Interface Pymol
e2y59C4 B:x,y,z->C:-X+1,Y-1/2,-Z+1 Inserted a+b domain in Dac-like proteins Interaction Interface Pymol
e2y59A3 B:-X+1,Y-1/2,-Z+1->A:x,y,z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol